Allowable value lists
Τhe following is a list of fields whose values have to be drawn from allowable values lists.
Number |
Field Name |
Description |
Allowable Values |
Example Values |
Default Value |
|---|---|---|---|---|---|
1 |
|
The unit used to represent XYZ locations or distances. |
SI units of Length |
nm, micron, mm, etc. |
micron |
2 |
|
The type of this Software used to produce results recorded in this table. |
SpotLoc, Tracing, SpotLoc+Tracing, Segmentation, QC, Other |
Not Applicable |
Not Applicable |
2 |
|
The unit used to represent a time interval. |
SI units of Time |
ms, s, min, hr, etc. |
s |
3 |
|
The type of cells reported in the Cell Data table. |
It is recommended to use an ontology term for example from the EFO ontology |
Primary cell line, Immortal cell line, Induced pluripotent stem (IPS) cell, Cell in tissue, Cell in organoid, Other. |
Not Applicable |
4 |
|
The type of sub-cellular structure ROIs reported in the Sub-Cell ROI Data table. |
It is recommended to use an ontology term such as a child of the EFO ‘cellular_component’ term |
Nucleolus, Nuclear Lamina (NL), Nuclear Pore Complex (NPC) PML_body, Cajal_body, Chromosome_Domain, etc. |
Not Applicable |
5 |
|
The type of extracellular structure ROIs reported in the Extra-Cell ROI Data table. |
It is recommended to use an ontology term such as a child of the EFO ‘organism part’ term |
Tissue, Organoid, etc. |
Not Applicable |